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| Locus name | AT1G61566 |
| Organism | Arabidopsis thaliana |
| Taxonomic identifier | [NCBI] |
| Function category | Lipid/Carbohydrate metabolism:alkalinization |
| Effect for Senescence | Unclear |
| Gene Description | Rapid alkalinization factor (RALF). |
| Evidence | Genomic evidence:microarray data [Ref 1] |
| References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
| Sequence | AT1G61566.1 | Genomic | mRNA | CDS | Protein
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| Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4) |
| Comparation |
Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction  | |
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| Details | | target: AT1G61566.1
miRNA: ath-miR831
miRNA: ath-miR831
mfe: -27.3 kcal/mol
p-value: 0.002448
position: 306
target 5' A A A 3'
GAGAGGA UGCGAG AGAUCA
UUCUUCU AUGCUU UCUAGU
miRNA 3' G C C 5'
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| Ortholog Group | |
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| Ortholog Groups: OG5_153192 | |
| Cross Link | |
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description | | Pfam | PF05498 | 2.1E-19 | 13 | 74 | IPR008801 | Rapid ALkalinization Factor |
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