Basic information
Locus name	AT5G54430
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	universal stress protein (USP) family protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process response to stress
Sequence	AT5G54430.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G54430.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -30.7 kcal/mol  p-value: 0.000568  position: 724  target 5' G   A                U  3'             UGG GAUGAUGAUGGAGAUG                 ACU CUACUACUACUUCUAC      miRNA  3'     G                U  5'
Ortholog Group
Ortholog Groups: OG5_191013	Accession Taxon NP_567770 Arabidopsis thaliana NP_568808 ( AT5G54430 ) Arabidopsis thaliana ACO67192 Micromonas sp. RCC299
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31966 1.2E-146 1 242 No hit NA Pfam PF00582 5.8E-27 47 203 IPR006016 UspA PRINTS PR01438 8.5E-7 47 65 IPR006015 Universal stress protein A SUPERFAMILY SSF52402 3.7E-26 48 209 No hit NA PRINTS PR01438 8.5E-7 181 203 IPR006015 Universal stress protein A
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787