Basic information
Locus name	AT3G56740
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ubiquitin-associated (UBA)/TS-N domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT3G56740.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_130723	Accession Taxon NP_191233 ( AT3G56740 ) Arabidopsis thaliana NP_850346 Arabidopsis thaliana CMT527C Cyanidioschyzon merolae strain 10D 148390 Chlamydomonas reinhardtii ACO65990 Micromonas sp. RCC299 NP_001042694 Oryza sativa Japonica Group fgenesh1_pg.C_Chr_01.0001000013 Ostreococcus tauri estExt_gwp_gw1.C_1040125 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_780058 Physcomitrella patens subsp. patens 29733.m000742 Ricinus communis estExt_fgenesh1_pg.C_chr_60671 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR13681 1.2E-72 5 293 No hit NA SUPERFAMILY SSF144091 1.7E-17 10 186 No hit NA Pfam PF04511 7.9E-6 12 104 IPR007599 Derlin SUPERFAMILY SSF46934 1.5E-13 241 290 IPR009060 UBA-like ProSiteProfiles PS50030 14.8 250 290 IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote Pfam PF00627 2.7E-10 252 287 IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal SMART SM00165 3.0E-11 252 289 IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote