Basic information
Locus name	AT4G38930
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ubiquitin fusion degradation UFD1 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process ubiquitin-dependent protein catabolic process
Sequence	AT4G38930.1 | Genomic | mRNA | CDS | Protein AT4G38930.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127577	Accession Taxon NP_001031384 Arabidopsis thaliana NP_001077933 Arabidopsis thaliana NP_180471 Arabidopsis thaliana NP_565504 Arabidopsis thaliana NP_568048 Arabidopsis thaliana NP_973557 Arabidopsis thaliana NP_974709 ( AT4G38930 ) Arabidopsis thaliana CMK008C Cyanidioschyzon merolae strain 10D 106366 Chlamydomonas reinhardtii NP_113220 Guillardia theta NP_001046095 Oryza sativa Japonica Group NP_001053629 Oryza sativa Japonica Group gw1.09.00.308.1 Ostreococcus tauri estExt_fgenesh1_pm.C_2450007 Physcomitrella patens subsp. patens 28650.m000184 Ricinus communis 30131.m007138 Ricinus communis gw1.3.497.1 Thalassiosira pseudonana CCMP1335 XP_002945651 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12555 1.8E-132 1 315 IPR004854 Ubiquitin fusion degradation protein UFD1 Pfam PF03152 1.3E-84 13 184 IPR004854 Ubiquitin fusion degradation protein UFD1