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Locus name | AT4G03960 |
Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Others | Effect for Senescence | unclear | Gene Description | tyrosine specific protein phosphatase family protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, phosphoprotein phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | Gene Ontology | | Sequence | AT4G03960.1 | Genomic | mRNA | CDS | Protein
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Ortholog Group | |
| Ortholog Groups: OG5_131528 | |
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR31126 | 2.9E-90 | 17 | 186 | No hit | NA | PRINTS | PR01911 | 6.5E-30 | 29 | 46 | IPR020428 | Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic | SUPERFAMILY | SSF52799 | 7.5E-40 | 29 | 176 | No hit | NA | Pfam | PF03162 | 2.2E-60 | 30 | 183 | IPR004861 | Protein-tyrosine phosphatase, SIW14-like | PRINTS | PR01911 | 6.5E-30 | 66 | 79 | IPR020428 | Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic | PRINTS | PR01911 | 6.5E-30 | 85 | 99 | IPR020428 | Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic | ProSiteProfiles | PS50056 | 9.1 | 97 | 137 | IPR000387 | Protein-tyrosine/Dual specificity phosphatase | PRINTS | PR01911 | 6.5E-30 | 102 | 116 | IPR020428 | Protein-tyrosine phosphatase, dual specificity phosphatase, eukaryotic | ProSitePatterns | PS00383 | NA | 124 | 134 | IPR016130 | Protein-tyrosine phosphatase, active site |
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