Basic information
Locus name	AT5G06060
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	redox regulation
Effect for Senescence	unclear
Gene Description	tropinone reductase, putative / tropine dehydrogenase, putative; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 23 plant structures;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process metabolic process molecular function oxidoreductase activity
Sequence	AT5G06060.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_146462	Accession Taxon NP_196225 ( AT5G06060 ) Arabidopsis thaliana 128624 Chlamydomonas reinhardtii NP_001049675 Oryza sativa Japonica Group NP_001049677 Oryza sativa Japonica Group gw1.16.00.195.1 Ostreococcus tauri estExt_Genewise1.C_4570006 Physcomitrella patens subsp. patens 30143.m001178 Ricinus communis e_gw1.1.583.1 Thalassiosira pseudonana CCMP1335 XP_002949555 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24310 1.1E-180 1 264 No hit NA SUPERFAMILY SSF51735 7.4E-81 11 256 No hit NA PRINTS PR00081 7.2E-41 13 30 IPR002347 Glucose/ribitol dehydrogenase Pfam PF13561 3.5E-35 21 254 No hit NA PRINTS PR00080 1.7E-8 88 99 IPR002198 Short-chain dehydrogenase/reductase SDR PRINTS PR00081 7.2E-41 88 99 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00081 7.2E-41 135 151 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00080 1.7E-8 141 149 IPR002198 Short-chain dehydrogenase/reductase SDR ProSitePatterns PS00061 NA 148 176 IPR020904 Short-chain dehydrogenase/reductase, conserved site PRINTS PR00080 1.7E-8 161 180 IPR002198 Short-chain dehydrogenase/reductase SDR PRINTS PR00081 7.2E-41 161 180 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00081 7.2E-41 182 199 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00081 7.2E-41 217 237 IPR002347 Glucose/ribitol dehydrogenase
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787