Basic information
Locus name	AT5G62600
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	transportin-SR-related; FUNCTIONS IN: protein transporter activity, binding; INVOLVED IN: intracellular protein transport, protein import into nucleus, docking; LOCATED IN: nucleus, nuclear pore, cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process intracellular protein transport cellular component nuclear pore molecular function binding protein transporter activity
Sequence	AT5G62600.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129491	Accession Taxon NP_201066 ( AT5G62600 ) Arabidopsis thaliana 97444 Chlamydomonas reinhardtii NP_001064858 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_610175 Physcomitrella patens subsp. patens 30147.m014032 Ricinus communis estExt_fgenesh1_pg.C_chr_20901 Thalassiosira pseudonana CCMP1335 XP_002950539 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF48371 4.7E-63 1 287 IPR016024 Armadillo-type fold PANTHER PTHR12363 0.0 7 947 No hit NA SMART SM00913 9.6E-5 26 93 IPR001494 Importin-beta, N-terminal Pfam PF08389 5.8E-21 98 243 IPR013598 Exportin-1/Importin-beta-like SUPERFAMILY SSF48371 4.7E-63 332 619 IPR016024 Armadillo-type fold SUPERFAMILY SSF48371 4.7E-63 668 830 IPR016024 Armadillo-type fold