Basic information
Locus name	AT5G37770
Alias	TCH2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	TOUCH 2 (TCH2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: in 13 processes; LOCATED IN: plasma membrane, actin cytoskeleton; EXPRESSED IN: 34 plant structures;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function calcium ion binding
Sequence	AT5G37770.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_138761	Accession Taxon NP_173866 Arabidopsis thaliana NP_198593 ( AT5G37770 ) Arabidopsis thaliana NP_564874 Arabidopsis thaliana NP_001045400 Oryza sativa Japonica Group NP_001055397 Oryza sativa Japonica Group e_gw1.103.41.1 Physcomitrella patens subsp. patens e_gw1.107.250.1 Physcomitrella patens subsp. patens e_gw1.131.108.1 Physcomitrella patens subsp. patens e_gw1.4.159.1 Physcomitrella patens subsp. patens e_gw1.77.63.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1680052 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_1000466 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_56000070 Physcomitrella patens subsp. patens gw1.107.104.1 Physcomitrella patens subsp. patens gw1.263.82.1 Physcomitrella patens subsp. patens 28609.m000203 Ricinus communis 29673.m000941 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10891 5.8E-101 7 159 No hit NA ProSiteProfiles PS50222 16.4 13 48 IPR002048 EF-hand domain SUPERFAMILY SSF47473 4.2E-44 15 155 No hit NA SMART SM00054 3.1E-7 17 45 IPR002048 EF-hand domain Pfam PF13499 4.5E-15 18 77 IPR011992 EF-hand-like domain ProSitePatterns PS00018 NA 26 38 IPR018247 EF-Hand 1, calcium-binding site ProSiteProfiles PS50222 12.3 49 84 IPR002048 EF-hand domain SMART SM00054 0.0 53 81 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 62 74 IPR018247 EF-Hand 1, calcium-binding site ProSiteProfiles PS50222 16.2 90 125 IPR002048 EF-hand domain SMART SM00054 6.2E-7 94 122 IPR002048 EF-hand domain Pfam PF13499 1.3E-14 95 155 IPR011992 EF-hand-like domain ProSitePatterns PS00018 NA 103 115 IPR018247 EF-Hand 1, calcium-binding site ProSiteProfiles PS50222 14.5 126 161 IPR002048 EF-hand domain SMART SM00054 1.1E-5 130 158 IPR002048 EF-hand domain ProSitePatterns PS00018 NA 139 151 IPR018247 EF-Hand 1, calcium-binding site
Subcellular Localization
Localization	vacuole,plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787