Basic information
Locus name	AT5G21990
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	tetratricopeptide repeat (TPR)-containing protein; FUNCTIONS IN: binding; INVOLVED IN: protein folding;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT5G21990.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_150141	Accession Taxon NP_680187 ( AT5G21990 ) Arabidopsis thaliana 166482 Chlamydomonas reinhardtii ACO70359 Micromonas sp. RCC299 NP_001058942 Oryza sativa Japonica Group 1100010096 Ostreococcus tauri estExt_fgenesh1_pg.C_800106 Physcomitrella patens subsp. patens 29854.m001111 Ricinus communis estExt_fgenesh1_pg.C_chr_10404 Thalassiosira pseudonana CCMP1335 XP_002946536 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10516 2.5E-86 1 285 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type SUPERFAMILY SSF48452 4.4E-21 99 224 No hit NA ProSiteProfiles PS50005 5.0 103 136 IPR019734 Tetratricopeptide repeat SMART SM00028 47.0 103 136 IPR019734 Tetratricopeptide repeat ProSiteProfiles PS50293 13.3 146 213 IPR013026 Tetratricopeptide repeat-containing domain SMART SM00028 450.0 146 179 IPR019734 Tetratricopeptide repeat Pfam PF13414 1.2E-7 154 211 No hit NA ProSiteProfiles PS50005 10.7 180 213 IPR019734 Tetratricopeptide repeat SMART SM00028 1.4E-5 180 213 IPR019734 Tetratricopeptide repeat
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787