Basic information
Locus name	AT4G17730
Alias	SYP23
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	SYNTAXIN OF PLANTS 23 (SYP23); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: membrane fusion, intracellular protein transport; LOCATED IN: plasma membrane;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process intracellular protein transport cellular component membrane molecular function SNAP receptor activity protein binding
Pathway	Reactome REACT_11184
Sequence	AT4G17730.1 | Genomic | mRNA | CDS | Protein AT4G17730.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_211665	Accession Taxon NP_001078403 ( AT4G17730 ) Arabidopsis thaliana NP_567537 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description SMART SM00503 4.0E-25 18 131 IPR006011 Syntaxin, N-terminal PANTHER PTHR19957 7.0E-132 25 250 No hit NA SUPERFAMILY SSF47661 9.8E-41 27 239 IPR010989 t-SNARE Pfam PF00804 1.5E-8 28 116 IPR006011 Syntaxin, N-terminal SMART SM00397 5.1E-17 179 246 IPR000727 Target SNARE coiled-coil domain ProSiteProfiles PS50192 16.4 184 246 IPR000727 Target SNARE coiled-coil domain Pfam PF05739 1.2E-18 189 249 IPR000727 Target SNARE coiled-coil domain ProSitePatterns PS00914 NA 190 229 IPR006012 Syntaxin/epimorphin, conserved site
Subcellular Localization
Localization 1 Localization cytosol Evidence SUBAcon Pubmed ID 23180787
Localization 2 Localization vacuole Evidence SUBAcon Pubmed ID 23180787