Basic information
Locus name	AT3G52400
Alias	SYP122
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	SYNTAXIN OF PLANTS 122 (SYP122); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: in 9 processes; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process intracellular protein transport cellular component membrane molecular function SNAP receptor activity protein binding
Pathway	Reactome REACT_11184
Sequence	AT3G52400.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR19957 4.3E-171 36 341 No hit NA SMART SM00503 7.2E-28 38 164 IPR006011 Syntaxin, N-terminal SUPERFAMILY SSF47661 3.5E-43 41 268 IPR010989 t-SNARE Pfam PF00804 1.2E-9 43 149 IPR006011 Syntaxin, N-terminal Coils Coil NA 142 163 No hit NA SMART SM00397 2.7E-17 208 275 IPR000727 Target SNARE coiled-coil domain ProSiteProfiles PS50192 18.6 213 275 IPR000727 Target SNARE coiled-coil domain Pfam PF05739 2.9E-21 218 280 IPR000727 Target SNARE coiled-coil domain ProSitePatterns PS00914 NA 219 258 IPR006012 Syntaxin/epimorphin, conserved site
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787