Basic information
Locus name	AT4G37460
Alias	SRFR1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	SUPPRESSOR OF RPS4-RLD 1 (SRFR1); FUNCTIONS IN: protein complex scaffold; INVOLVED IN: defense response to bacterium, incompatible interaction, defense response to bacterium, negative regulation of transcription; LOCATED IN: nucleus, cytoplasm, perinuclear region of cytoplasm;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT4G37460.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_133848	Accession Taxon NP_195462 ( AT4G37460 ) Arabidopsis thaliana 146371 Chlamydomonas reinhardtii NP_001058749 Oryza sativa Japonica Group e_gw1.76.104.1 Physcomitrella patens subsp. patens 29970.m001026 Ricinus communis XP_002952037 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23083 0.0 9 838 No hit NA SUPERFAMILY SSF48452 3.5E-43 38 114 No hit NA SMART SM00028 12.0 39 72 IPR019734 Tetratricopeptide repeat Pfam PF00515 0.0 43 70 IPR001440 Tetratricopeptide TPR-1 SMART SM00028 190.0 73 106 IPR019734 Tetratricopeptide repeat Coils Coil NA 113 134 No hit NA ProSiteProfiles PS50005 9.1 297 330 IPR019734 Tetratricopeptide repeat ProSiteProfiles PS50293 48.3 297 534 IPR013026 Tetratricopeptide repeat-containing domain SMART SM00028 0.1 297 330 IPR019734 Tetratricopeptide repeat SUPERFAMILY SSF48452 3.5E-43 301 563 No hit NA Pfam PF13414 9.2E-10 303 362 No hit NA ProSiteProfiles PS50005 9.9 331 364 IPR019734 Tetratricopeptide repeat SMART SM00028 0.0 331 364 IPR019734 Tetratricopeptide repeat Pfam PF13414 2.6E-10 365 427 No hit NA ProSiteProfiles PS50005 11.1 365 398 IPR019734 Tetratricopeptide repeat SMART SM00028 4.8E-5 365 398 IPR019734 Tetratricopeptide repeat ProSiteProfiles PS50005 6.1 399 432 IPR019734 Tetratricopeptide repeat SMART SM00028 1.2 399 432 IPR019734 Tetratricopeptide repeat ProSiteProfiles PS50005 9.8 433 466 IPR019734 Tetratricopeptide repeat SMART SM00028 0.0 433 466 IPR019734 Tetratricopeptide repeat Pfam PF13414 1.2E-10 434 497 No hit NA ProSiteProfiles PS50005 8.4 467 500 IPR019734 Tetratricopeptide repeat SMART SM00028 3.2 467 500 IPR019734 Tetratricopeptide repeat SMART SM00028 10.0 501 534 IPR019734 Tetratricopeptide repeat Pfam PF13414 7.7E-7 502 559 No hit NA ProSiteProfiles PS50005 7.7 534 567 IPR019734 Tetratricopeptide repeat ProSiteProfiles PS50293 8.0 534 567 IPR013026 Tetratricopeptide repeat-containing domain SMART SM00028 59.0 535 567 IPR019734 Tetratricopeptide repeat
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787