Basic information
Locus name	AT5G03650
Alias	SBE2.2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	starch branching enzyme 2.2 (SBE2.2); FUNCTIONS IN: 1,4-alpha-glucan branching enzyme activity; INVOLVED IN: amylopectin biosynthetic process, starch metabolic process; LOCATED IN: chloroplast, chloroplast stroma;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process carbohydrate metabolic process glycogen biosynthetic process molecular function 1,4-alpha-glucan branching enzyme activity catalytic activity cation binding
Pathway	KEGG map00500 (EC 2.4.1.18) MetaCyc PWY-5067 PWY-622 Reactome REACT_474
Sequence	AT5G03650.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127579	Accession Taxon NP_181180 Arabidopsis thaliana NP_195985 ( AT5G03650 ) Arabidopsis thaliana CMH144C Cyanidioschyzon merolae strain 10D 118976 Chlamydomonas reinhardtii 142128 Chlamydomonas reinhardtii 94079 Chlamydomonas reinhardtii ACO66396 Micromonas sp. RCC299 ACO68806 Micromonas sp. RCC299 ACO69214 Micromonas sp. RCC299 NP_001047009 Oryza sativa Japonica Group NP_001058629 Oryza sativa Japonica Group 0300010084 Ostreococcus tauri estExt_gwp_GeneWisePlus.C_Chr_04.00010531 Ostreococcus tauri e_gw1.54.169.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_150109 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_640051 Physcomitrella patens subsp. patens 27496.m000095 Ricinus communis 30170.m014359 Ricinus communis XP_002945884 Volvox carteri f. nagariensis XP_002952735 Volvox carteri f. nagariensis XP_002955298 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PIRSF PIRSF000463 2.0E-173 56 805 IPR006407 1,4-alpha-glucan-branching enzyme PANTHER PTHR10357 0.0 79 805 IPR015902 Glycoside hydrolase, family 13 SUPERFAMILY SSF81296 4.0E-19 163 266 IPR014756 Immunoglobulin E-set Pfam PF02922 2.2E-17 169 252 IPR004193 Glycoside hydrolase, family 13, N-terminal SUPERFAMILY SSF51445 6.4E-90 281 698 IPR017853 Glycoside hydrolase, superfamily SMART SM00642 1.3E-6 304 680 IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic domain Pfam PF00128 1.3E-13 318 481 IPR006047 Glycosyl hydrolase, family 13, catalytic domain SUPERFAMILY SSF51011 2.2E-26 703 801 No hit NA Pfam PF02806 4.4E-20 707 801 IPR006048 Alpha-amylase, C-terminal all beta
Subcellular Localization
Localization	plastid
Evidence	SUBAcon
Pubmed ID	23180787