Leaf Senescence DataBase

Basic information

Locus name

AT5G24150

Alias

SQP1

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

redox regulation

Effect for Senescence

unclear

Gene Description

SQP1; FUNCTIONS IN: squalene monooxygenase activity; INVOLVED IN: sterol biosynthetic process; LOCATED IN: endomembrane system, integral to membrane;

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

biological process	metabolic process
molecular function	oxidoreductase activity

Pathway

KEGG	map00100 (EC 1.14.99.7)
MetaCyc	PWY-5670 PWY-6098

Sequence

Ortholog Group

Ortholog Groups: OG5_177285

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR13789	4.8E-229	8	472	No hit	NA
SUPERFAMILY	SSF51905	4.8E-41	46	219	No hit	NA
Pfam	PF01266	1.6E-6	47	77	IPR006076	FAD dependent oxidoreductase
PRINTS	PR00420	4.9E-9	47	69	IPR003042	Aromatic-ring hydroxylase-like
PRINTS	PR00420	4.9E-9	198	213	IPR003042	Aromatic-ring hydroxylase-like
Pfam	PF08491	1.1E-112	199	472	IPR013698	Squalene epoxidase
SUPERFAMILY	SSF51905	4.8E-41	314	419	No hit	NA
PRINTS	PR00420	4.9E-9	327	342	IPR003042	Aromatic-ring hydroxylase-like
PRINTS	PR00420	4.9E-9	342	358	IPR003042	Aromatic-ring hydroxylase-like

Subcellular Localization

Localization 1
	Localization	plasma membrane,endoplasmic reticulum
	Evidence	SUBAcon
	Pubmed ID	23180787