Basic information
Locus name	AT4G09340
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	SPla/RYanodine receptor (SPRY) domain-containing protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT4G09340.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128341	Accession Taxon NP_174777 Arabidopsis thaliana NP_192672 ( AT4G09340 ) Arabidopsis thaliana NP_973963 Arabidopsis thaliana CMP137C Cyanidioschyzon merolae strain 10D 121700 Chlamydomonas reinhardtii 191305 Chlamydomonas reinhardtii NP_113404 Guillardia theta ACO68559 Micromonas sp. RCC299 estExt_fgenesh1_pg.C_2080073 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_251000012 Physcomitrella patens subsp. patens gw1.129.92.1 Physcomitrella patens subsp. patens gw1.4.350.1 Physcomitrella patens subsp. patens 30074.m001425 Ricinus communis XP_002948382 Volvox carteri f. nagariensis XP_002953850 Volvox carteri f. nagariensis XP_002954769 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS50188 19.5 10 198 IPR001870 B30.2/SPRY domain PANTHER PTHR12864 8.3E-133 20 422 No hit NA SUPERFAMILY SSF49899 3.2E-20 38 205 IPR008985 Concanavalin A-like lectin/glucanases superfamily SMART SM00449 5.3E-13 76 197 IPR018355 SPla/RYanodine receptor subgroup Pfam PF00622 3.8E-20 78 196 IPR003877 SPla/RYanodine receptor SPRY ProSiteProfiles PS50896 9.0 223 255 IPR006594 LisH dimerisation motif ProSiteProfiles PS50897 14.1 272 330 IPR006595 CTLH, C-terminal LisH motif SMART SM00668 3.2E-15 272 330 IPR006595 CTLH, C-terminal LisH motif Pfam PF10607 6.5E-26 275 416 IPR024964 CTLH/CRA C-terminal to LisH motif domain SMART SM00757 1.5E-27 326 424 IPR013144 CRA domain