Basic information
Locus name	AT5G59140
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	SKP1 family protein; FUNCTIONS IN: protein binding; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: cellular_component unknown;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process ubiquitin-dependent protein catabolic process
Pathway	Reactome REACT_6185
Sequence	AT5G59140.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128120	Accession Taxon NP_568900 ( AT5G59140 ) Arabidopsis thaliana CMD168C Cyanidioschyzon merolae strain 10D 159711 Chlamydomonas reinhardtii ACO65251 Micromonas sp. RCC299 NP_001068558 Oryza sativa Japonica Group 1200010125 Ostreococcus tauri e_gw1.424.15.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_680169 Physcomitrella patens subsp. patens 29751.m001857 Ricinus communis gw1.5.579.1 Thalassiosira pseudonana CCMP1335 XP_002948468 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR20648 5.1E-51 2 96 No hit NA SMART SM00512 2.5E-6 2 96 IPR001232 SKP1 component SUPERFAMILY SSF54695 7.9E-32 4 95 IPR011333 BTB/POZ fold Pfam PF03931 6.5E-10 5 62 IPR016073 SKP1 component, POZ
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787