Basic information
Locus name	AT5G58170
Alias	SVL5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	SHV3-LIKE 5 (SVL5); FUNCTIONS IN: phosphoric diester hydrolase activity, glycerophosphodiester phosphodiesterase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process glycerol metabolic process molecular function glycerophosphodiester phosphodiesterase activity
Sequence	AT5G58170.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_139555	Accession Taxon NP_176869 Arabidopsis thaliana NP_176870 Arabidopsis thaliana NP_188688 Arabidopsis thaliana NP_200359 Arabidopsis thaliana NP_200613 Arabidopsis thaliana NP_200625 ( AT5G58170 ) Arabidopsis thaliana NP_567755 Arabidopsis thaliana NP_001046128 Oryza sativa Japonica Group NP_001047275 Oryza sativa Japonica Group NP_001053060 Oryza sativa Japonica Group NP_001062173 Oryza sativa Japonica Group e_gw1.22.238.1 Physcomitrella patens subsp. patens e_gw1.86.13.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_220241 Physcomitrella patens subsp. patens 27613.m000618 Ricinus communis 29737.m001220 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF51695 5.0E-36 40 337 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Pfam PF03009 4.8E-6 76 332 IPR004129 Glycerophosphoryl diester phosphodiesterase PANTHER PTHR23344 1.1E-90 230 687 IPR004129 Glycerophosphoryl diester phosphodiesterase SUPERFAMILY SSF51695 4.7E-45 355 654 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain Pfam PF03009 5.5E-27 360 649 IPR004129 Glycerophosphoryl diester phosphodiesterase