Basic information
Locus name	AT5G45160
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	root hair defective 3 GTP-binding (RHD3) family protein; FUNCTIONS IN: GTP binding; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: RHD3 (ROOT HAIR DEFECTIVE 3); GTP binding (TAIR:AT3G13870.1).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT5G45160.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128997	Accession Taxon NP_177439 Arabidopsis thaliana NP_188003 Arabidopsis thaliana NP_199329 ( AT5G45160 ) Arabidopsis thaliana NP_974308 Arabidopsis thaliana CMN141C Cyanidioschyzon merolae strain 10D 114371 Chlamydomonas reinhardtii ACO66003 Micromonas sp. RCC299 NP_001043388 Oryza sativa Japonica Group NP_001067218 Oryza sativa Japonica Group NP_001068156 Oryza sativa Japonica Group fgenesh1_pg.C_Chr_04.0001000042 Ostreococcus tauri estExt_Genewise1.C_330172 Physcomitrella patens subsp. patens estExt_Genewise1.C_3820007 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_1320056 Physcomitrella patens subsp. patens 28694.m000671 Ricinus communis 30186.m001314 Ricinus communis XP_002946414 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31695 1.0E-215 3 819 No hit NA Hamap MF_03109 19.1 9 764 IPR008803 RHD3/Sey1 SUPERFAMILY SSF52540 8.9E-33 10 246 IPR027417 P-loop containing nucleoside triphosphate hydrolase Pfam PF05879 0.0 46 790 IPR008803 RHD3/Sey1 Coils Coil NA 218 239 No hit NA
Subcellular Localization
Localization	cytosol,nucleus
Evidence	SUBAcon
Pubmed ID	23180787