Basic information
Locus name	AT3G59920
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	signal transduction
Effect for Senescence	unclear
Gene Description	RAB GDP DISSOCIATION INHIBITOR 2 (ATGDI2); FUNCTIONS IN: RAB GDP-dissociation inhibitor activity; INVOLVED IN: regulation of GTPase activity, protein transport; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Rab GTPase activator (InterPro:IPR002005), GDP dissociation inhibitor (InterPro:IPR018203), Rab GDI protein (InterPro:IPR000806);
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein transport molecular function Rab GDP-dissociation inhibitor activity
Pathway	Reactome REACT_11044
Sequence	AT3G59920.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127353	Accession Taxon NP_001078054 Arabidopsis thaliana NP_181938 Arabidopsis thaliana NP_191551 ( AT3G59920 ) Arabidopsis thaliana NP_196517 Arabidopsis thaliana CML223C Cyanidioschyzon merolae strain 10D 191319 Chlamydomonas reinhardtii ACO62449 Micromonas sp. RCC299 NP_001049717 Oryza sativa Japonica Group NP_001055142 Oryza sativa Japonica Group NP_001055566 Oryza sativa Japonica Group NP_001059344 Oryza sativa Japonica Group fgenesh1_pg.C_Chr_18.0001000145 Ostreococcus tauri estExt_Genewise1.C_1000003 Physcomitrella patens subsp. patens estExt_Genewise1.C_1670004 Physcomitrella patens subsp. patens estExt_fgenesh1_kg.C_200001 Physcomitrella patens subsp. patens estExt_fgenesh1_kg.C_850004 Physcomitrella patens subsp. patens 29838.m001692 Ricinus communis 29913.m000155 Ricinus communis 30221.m002217 Ricinus communis estExt_fgenesh1_pm.C_chr_20063 Thalassiosira pseudonana CCMP1335 XP_002955697 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11787 4.3E-255 1 433 No hit NA Pfam PF00996 1.6E-212 1 433 IPR018203 GDP dissociation inhibitor SUPERFAMILY SSF51905 5.2E-58 1 356 No hit NA PRINTS PR00891 2.9E-70 6 24 IPR018203 GDP dissociation inhibitor PRINTS PR00892 8.3E-75 16 28 IPR000806 Rab GDI protein PRINTS PR00891 2.9E-70 24 41 IPR018203 GDP dissociation inhibitor PRINTS PR00891 2.9E-70 69 86 IPR018203 GDP dissociation inhibitor PRINTS PR00892 8.3E-75 75 88 IPR000806 Rab GDI protein PRINTS PR00891 2.9E-70 86 102 IPR018203 GDP dissociation inhibitor PRINTS PR00892 8.3E-75 125 140 IPR000806 Rab GDI protein PRINTS PR00891 2.9E-70 135 150 IPR018203 GDP dissociation inhibitor PRINTS PR00892 8.3E-75 182 196 IPR000806 Rab GDI protein PRINTS PR00891 2.9E-70 212 229 IPR018203 GDP dissociation inhibitor PRINTS PR00891 2.9E-70 230 251 IPR018203 GDP dissociation inhibitor PRINTS PR00892 8.3E-75 280 294 IPR000806 Rab GDI protein PRINTS PR00892 8.3E-75 323 339 IPR000806 Rab GDI protein PRINTS PR00892 8.3E-75 348 366 IPR000806 Rab GDI protein PRINTS PR00892 8.3E-75 381 400 IPR000806 Rab GDI protein SUPERFAMILY SSF51905 1.9E-13 390 433 No hit NA PRINTS PR00892 8.3E-75 402 422 IPR000806 Rab GDI protein
Subcellular Localization
Localization	cytosol,extracellular
Evidence	SUBAcon
Pubmed ID	23180787