Basic information
Locus name	AT3G28690
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	protein kinase-related;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein phosphorylation molecular function ATP binding protein kinase activity protein serine/threonine kinase activity
Sequence	AT3G28690.1 | Genomic | mRNA | CDS | Protein AT3G28690.2 | Genomic | mRNA | CDS | Protein AT3G28690.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G28690.1  miRNA: ath-miR156a miRNA: ath-miR156a mfe: -35.2 kcal/mol  p-value: 0.000164  position: 837  target 5' A                    U  3'             GUGCUCACUUUCUUUUGUUA                 CACGAGUGAGAGAAGACAGU      miRNA  3'                         5'  target: AT3G28690.1  miRNA: ath-miR156b miRNA: ath-miR156b mfe: -35.2 kcal/mol  p-value: 0.000637  position: 837  target 5' A                    U  3'             GUGCUCACUUUCUUUUGUUA                 CACGAGUGAGAGAAGACAGU      miRNA  3'                         5'  target: AT3G28690.1  miRNA: ath-miR156c miRNA: ath-miR156c mfe: -35.2 kcal/mol  p-value: 0.000396  position: 837  target 5' A                    U  3'             GUGCUCACUUUCUUUUGUUA                 CACGAGUGAGAGAAGACAGU      miRNA  3'                         5'  target: AT3G28690.1  miRNA: ath-miR156d miRNA: ath-miR156d mfe: -35.2 kcal/mol  p-value: 0.000435  position: 837  target 5' A                    U  3'             GUGCUCACUUUCUUUUGUUA                 CACGAGUGAGAGAAGACAGU      miRNA  3'                         5'  target: AT3G28690.1  miRNA: ath-miR156e miRNA: ath-miR156e mfe: -35.2 kcal/mol  p-value: 0.000528  position: 837  target 5' A                    U  3'             GUGCUCACUUUCUUUUGUUA                 CACGAGUGAGAGAAGACAGU      miRNA  3'                         5'  target: AT3G28690.1  miRNA: ath-miR156f miRNA: ath-miR156f mfe: -35.2 kcal/mol  p-value: 0.000316  position: 837  target 5' A                    U  3'             GUGCUCACUUUCUUUUGUUA                 CACGAGUGAGAGAAGACAGU      miRNA  3'                         5'  target: AT3G28690.1  miRNA: ath-miR156g miRNA: ath-miR156g mfe: -34.6 kcal/mol  p-value: 0.001089  position: 837  target 5' A                   A  3'             GUGCUCACUUUCUUUUGUU                 CACGAGUGAGAGAAGACAG      miRNA  3'                     C  5'  target: AT3G28690.1  miRNA: ath-miR156h miRNA: ath-miR156h mfe: -29.7 kcal/mol  p-value: 0.001252  position: 837  target 5' A      A             U  3'             GUGCUC CUUUCUUUUGUUA                 CACGAG GAAAGAAGACAGU      miRNA  3'        A                5'
Ortholog Group
Ortholog Groups: OG5_147118	Accession Taxon NP_001030790 ( AT3G28690 ) Arabidopsis thaliana NP_001154651 Arabidopsis thaliana NP_186779 Arabidopsis thaliana NP_189510 Arabidopsis thaliana NP_197012 Arabidopsis thaliana NP_001043435 Oryza sativa Japonica Group NP_001062980 Oryza sativa Japonica Group estExt_Genewise1.C_2070002 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_310156 Physcomitrella patens subsp. patens 29736.m002037 Ricinus communis 29822.m003471 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24420 1.9E-257 1 341 No hit NA SUPERFAMILY SSF56112 1.8E-80 7 306 IPR011009 Protein kinase-like domain ProSiteProfiles PS50011 38.6 26 312 IPR000719 Protein kinase, catalytic domain Pfam PF00069 1.8E-47 29 304 IPR000719 Protein kinase, catalytic domain ProSitePatterns PS00107 NA 32 64 IPR017441 Protein kinase, ATP binding site ProSitePatterns PS00108 NA 155 167 IPR008271 Serine/threonine-protein kinase, active site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787