Basic information   
Locus name AT5G25440
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryProtein degradation/modification
Effect for Senescenceunclear
Gene Descriptionprotein kinase family protein; FUNCTIONS IN: protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane;
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
SequenceAT5G25440.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT5G25440.1 
miRNA: ath-miR868-5p
miRNA: ath-miR868-5p
mfe: -30.6 kcal/mol 
p-value: 0.000326 

position: 344 
target 5' U               U     U  3' 
           UGGCUACUGUUAUGA CGUGA     
           ACUGAUGAUAAUGCU GUACU     
miRNA  3' C                        5' 
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR244204.8E-23611313No hitNA
SUPERFAMILYSSF561125.8E-5020308IPR011009Protein kinase-like domain
ProSiteProfilesPS5001124.943311IPR000719Protein kinase, catalytic domain
PfamPF077141.8E-3157307IPR001245Serine-threonine/tyrosine-protein kinase catalytic domain
Subcellular Localization   
Localization 1
Localizationnucleus
EvidenceLocalization with GFP-fusion protein (GFP:cDNA)
Pubmed ID10737809
Localization 2
Localizationcytoplasm and nucleus
EvidenceLocalization with GFP-ORF fusion protein (GFP:cDNA)
Pubmed ID15610358
Localization 3
Localizationcytosol
EvidenceSUBAcon
Pubmed ID23180787