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Locus name | AT2G26400 |
Alias | ATARD3 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Others:dioxygenase |
Effect for Senescence | Unclear |
Gene Description | Acireductone dioxygenase (ARD/ARD). |
Evidence | Genomice evidence: microarray data [Ref 1] |
References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
Gene Ontology | |
Pathway | |
Sequence | AT2G26400.1 | Genomic | mRNA | CDS | Protein
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Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4) |
Comparation |
Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction | |
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Details | | target: AT2G26400.1 miRNA: ath-miR837-5p miRNA: ath-miR837-5p mfe: -24.8 kcal/mol p-value: 0.011557
position: 191 target 5' A C A 3' UGAAAC GAUGAGGAAUUGA ACUUUG UUGUUCUUUGACU miRNA 3' C A 5'
target: AT2G26400.1 miRNA: ath-miR857 miRNA: ath-miR857 mfe: -21.1 kcal/mol p-value: 0.032698
position: 603 target 5' C G G A C 3' AUA AC CUUCAGCGUA AGAA UAU UG GAAGUUGUAU UUUU miRNA 3' G G 5'
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Ortholog Group | |
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Ortholog Groups: OG5_128685 | |
Cross Link | |
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