Basic information
Locus name	AT5G19900
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	PRLI-interacting factor-related; FUNCTIONS IN: protein binding; LOCATED IN: chloroplast;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT5G19900.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G19900.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -32.5 kcal/mol  p-value: 0.000533  position: 779  target 5' A   G  G              A  3'             UGA GA GAUGAUGAAGAUGA                 ACU CU CUACUACUUCUACU      miRNA  3'     G  A                 5'
Ortholog Group
Ortholog Groups: OG5_153369	Accession Taxon NP_197490 ( AT5G19900 ) Arabidopsis thaliana 190511 Chlamydomonas reinhardtii NP_001048629 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_3760022 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_530028 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_219000020 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_36000202 Physcomitrella patens subsp. patens 28035.m000357 Ricinus communis XP_002957673 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Coils Coil NA 305 340 No hit NA