Basic information
Locus name	AT5G40670
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	PQ-loop repeat family protein / transmembrane family protein; LOCATED IN: membrane;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT5G40670.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129926	Accession Taxon NP_198883 ( AT5G40670 ) Arabidopsis thaliana NP_001066568 Oryza sativa Japonica Group estExt_Genewise1.C_640092 Physcomitrella patens subsp. patens 29633.m000900 Ricinus communis e_gw1.11a.78.1 Thalassiosira pseudonana CCMP1335 estExt_thaps1_ua_kg.C_chr_150026 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR13131 6.7E-135 4 261 IPR005282 Lysosomal cystine transporter TIGRFAM TIGR00951 5.1E-74 11 243 IPR005282 Lysosomal cystine transporter Pfam PF04193 2.1E-18 14 71 No hit NA SMART SM00679 1.9E-6 26 57 IPR006603 Cystinosin/ERS1p repeat Pfam PF04193 7.0E-16 152 209 No hit NA SMART SM00679 7.1E-8 165 196 IPR006603 Cystinosin/ERS1p repeat
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787