Basic information
Locus name	AT5G12130
Alias	PDE149
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	PIGMENT DEFECTIVE 149 (PDE149); INVOLVED IN: thylakoid membrane organization; LOCATED IN: chloroplast thylakoid membrane, integral to membrane;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component integral to membrane
Sequence	AT5G12130.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_134855	Accession Taxon NP_568257 ( AT5G12130 ) Arabidopsis thaliana CMM279C Cyanidioschyzon merolae strain 10D 121861 Chlamydomonas reinhardtii ACO66576 Micromonas sp. RCC299 NP_001054496 Oryza sativa Japonica Group gw1.15.00.163.1 Ostreococcus tauri estExt_gwp_gw1.C_460072 Physcomitrella patens subsp. patens 29805.m001511 Ricinus communis e_gw1.4.330.1 Thalassiosira pseudonana CCMP1335 XP_002949032 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR30238 1.2E-161 68 377 No hit NA TIGRFAM TIGR03718 4.7E-95 100 380 IPR022369 Integral membrane protein TerC, riboswitch-linked Pfam PF03741 1.9E-53 147 350 IPR005496 Integral membrane protein TerC
Subcellular Localization
Localization	plastid
Evidence	SUBAcon
Pubmed ID	23180787