Basic information
Locus name	AT3G48195
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	phox (PX) domain-containing protein; FUNCTIONS IN: protein binding, phosphoinositide binding; INVOLVED IN: intracellular signaling cascade, cell communication; EXPRESSED IN: cultured cell;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process cell communication molecular function phosphatidylinositol binding protein binding
Sequence	AT3G48195.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G48195.1  miRNA: ath-miR5630a miRNA: ath-miR5630a mfe: -33.6 kcal/mol  p-value: 0.003073  position: 1444  target 5' A              G     A  3'             CC UCAGAACCGUU UUGGC                 GG AGUCUUGGCGA AAUCG      miRNA  3' A  U           G        5'  target: AT3G48195.1  miRNA: ath-miR5630b miRNA: ath-miR5630b mfe: -33.6 kcal/mol  p-value: 0.003644  position: 1444  target 5' A              G     A  3'             CC UCAGAACCGUU UUGGC                 GG AGUCUUGGCGA AAUCG      miRNA  3' A  U           G        5'
Ortholog Group
Ortholog Groups: OG5_133092	Accession Taxon NP_680104 ( AT3G48195 ) Arabidopsis thaliana NP_001043296 Oryza sativa Japonica Group estExt_gwp_gw1.C_1490081 Physcomitrella patens subsp. patens 30147.m013932 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS50195 11.7 481 601 IPR001683 Phox homologous domain SMART SM00312 0.0 487 597 IPR001683 Phox homologous domain Pfam PF00787 3.9E-13 491 596 IPR001683 Phox homologous domain SUPERFAMILY SSF64268 1.6E-17 494 598 IPR001683 Phox homologous domain PANTHER PTHR12326 4.3E-91 630 909 No hit NA Pfam PF13901 4.9E-59 681 888 IPR025258 Domain of unknown function DUF4206
Subcellular Localization
Localization	cytosol,nucleus
Evidence	SUBAcon
Pubmed ID	23180787