Basic information
Locus name	AT5G04540
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	phosphatase/ protein tyrosine phosphatase; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity; INVOLVED IN: dephosphorylation;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process dephosphorylation molecular function phosphatase activity protein tyrosine phosphatase activity
Sequence	AT5G04540.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128154	Accession Taxon NP_187666 Arabidopsis thaliana NP_196074 ( AT5G04540 ) Arabidopsis thaliana NP_001062478 Oryza sativa Japonica Group fgenesh1_pg.scaffold_33000139 Physcomitrella patens subsp. patens gw1.71.39.1 Physcomitrella patens subsp. patens 28077.m000082 Ricinus communis thaps1_ua_kg.chr_2000003 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description SMART SM00568 2.6E-10 42 109 IPR004182 GRAM SUPERFAMILY SSF50729 1.6E-16 49 173 No hit NA PANTHER PTHR10807 0.0 54 830 No hit NA ProSiteProfiles PS51339 109.5 181 647 IPR017906 Myotubularin phosphatase domain SUPERFAMILY SSF52799 3.5E-122 213 494 No hit NA Pfam PF06602 5.3E-41 228 350 IPR010569 Myotubularin-related Pfam PF13849 1.3E-31 435 488 No hit NA ProSitePatterns PS00383 NA 438 448 IPR016130 Protein-tyrosine phosphatase, active site SUPERFAMILY SSF52799 3.5E-122 532 651 No hit NA Coils Coil NA 665 718 No hit NA