Basic information
Locus name	AT5G07430
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	pectinesterase family protein; FUNCTIONS IN: pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process cell wall modification cellular component cell wall molecular function pectinesterase activity
Pathway	KEGG map00040 (EC 3.1.1.11) map00500 (EC 3.1.1.11) MetaCyc PWY-1081
Sequence	AT5G07430.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G07430.1  miRNA: ath-miR5648-5p miRNA: ath-miR5648-5p mfe: -28.4 kcal/mol  p-value: 0.001289  position: 551  target 5' C   U                 G  3'             GUC GGGCUGAAUAUUUCCAG                 CAG UUCGGUUUAUAAAGGUU      miRNA  3' U                     U  5'
Ortholog Group
Ortholog Groups: OG5_150276	Accession Taxon NP_177152 Arabidopsis thaliana NP_196359 Arabidopsis thaliana NP_196360 ( AT5G07430 ) Arabidopsis thaliana NP_200976 Arabidopsis thaliana NP_568181 Arabidopsis thaliana 28859.m000330 Ricinus communis 30147.m014360 Ricinus communis 30147.m014361 Ricinus communis 30147.m014362 Ricinus communis 30147.m014363 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31321 2.2E-166 1 361 No hit NA SUPERFAMILY SSF51126 4.4E-81 62 355 IPR011050 Pectin lyase fold/virulence factor Pfam PF01095 9.1E-62 67 351 IPR000070 Pectinesterase, catalytic