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| Locus name | AT3G55140 |
| Organism | Arabidopsis thaliana | | Taxonomic identifier | [NCBI] | | Function category | Others | | Effect for Senescence | unclear | | Gene Description | pectate lyase family protein; FUNCTIONS IN: lyase activity, pectate lyase activity; | | Evidence | Genomic evidence:microarray data [Ref 1] | | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | | Sequence | AT3G55140.1 | Genomic | mRNA | CDS | Protein
AT3G55140.2 | Genomic | mRNA | CDS | Protein
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miRNA Interaction  | |
| | Details | | target: AT3G55140.1
miRNA: ath-miR838
miRNA: ath-miR838
mfe: -28.9 kcal/mol
p-value: 0.001549
position: 195
target 5' C A G 3'
GUG AGGAGGUAGGAGGAAA
CAC UUCUUCAUCUUCUUUU
miRNA 3' A G 5'
target: AT3G55140.2
miRNA: ath-miR838
miRNA: ath-miR838
mfe: -28.9 kcal/mol
p-value: 0.001816
position: 353
target 5' C A G 3'
GUG AGGAGGUAGGAGGAAA
CAC UUCUUCAUCUUCUUUU
miRNA 3' A G 5'
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| Ortholog Group | |
| | Ortholog Groups: OG5_140233 | |
| Cross Link | |
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