Basic information
Locus name	AT5G50230
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	nucleotide binding; FUNCTIONS IN: nucleotide binding; INVOLVED IN: multicellular organismal development; LOCATED IN: heterotrimeric G-protein complex;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT5G50230.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129719	Accession Taxon NP_199834 ( AT5G50230 ) Arabidopsis thaliana ACO64052 Micromonas sp. RCC299 NP_001051251 Oryza sativa Japonica Group e_gw1.12.00.228.1 Ostreococcus tauri estExt_fgenesh1_pg.C_70198 Physcomitrella patens subsp. patens 30147.m013828 Ricinus communis thaps1_ua_kg.chr_4000080 Thalassiosira pseudonana CCMP1335 XP_002957983 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Coils Coil NA 1 22 No hit NA PANTHER PTHR19878 1.9E-156 1 509 No hit NA Pfam PF08614 3.7E-14 42 169 IPR013923 Autophagy-related protein 16 Coils Coil NA 86 156 No hit NA Coils Coil NA 164 185 No hit NA SUPERFAMILY SSF50978 1.2E-68 213 508 IPR017986 WD40-repeat-containing domain SMART SM00320 4.4E-4 214 253 IPR001680 WD40 repeat Pfam PF00400 2.5E-4 217 253 IPR001680 WD40 repeat ProSiteProfiles PS50082 13.0 221 262 IPR001680 WD40 repeat ProSiteProfiles PS50294 47.8 221 509 IPR017986 WD40-repeat-containing domain PRINTS PR00320 5.2E-7 240 254 IPR020472 G-protein beta WD-40 repeat ProSitePatterns PS00678 NA 240 254 IPR019775 WD40 repeat, conserved site SMART SM00320 0.0 256 295 IPR001680 WD40 repeat ProSiteProfiles PS50082 9.0 263 304 IPR001680 WD40 repeat SMART SM00320 4.9E-9 298 338 IPR001680 WD40 repeat Pfam PF00400 1.2E-8 301 338 IPR001680 WD40 repeat ProSiteProfiles PS50082 12.9 305 347 IPR001680 WD40 repeat PRINTS PR00320 5.2E-7 325 339 IPR020472 G-protein beta WD-40 repeat ProSitePatterns PS00678 NA 325 339 IPR019775 WD40 repeat, conserved site SMART SM00320 0.0 341 379 IPR001680 WD40 repeat Pfam PF00400 0.0 351 379 IPR001680 WD40 repeat ProSiteProfiles PS50082 9.8 362 388 IPR001680 WD40 repeat PRINTS PR00320 5.2E-7 366 380 IPR020472 G-protein beta WD-40 repeat ProSitePatterns PS00678 NA 366 380 IPR019775 WD40 repeat, conserved site SMART SM00320 4.3E-5 382 421 IPR001680 WD40 repeat Pfam PF00400 2.8E-5 384 421 IPR001680 WD40 repeat ProSiteProfiles PS50082 10.4 389 424 IPR001680 WD40 repeat SMART SM00320 0.1 424 467 IPR001680 WD40 repeat Pfam PF00400 0.0 446 467 IPR001680 WD40 repeat ProSiteProfiles PS50082 10.6 448 476 IPR001680 WD40 repeat SMART SM00320 0.0 470 509 IPR001680 WD40 repeat Pfam PF00400 0.0 472 508 IPR001680 WD40 repeat