Basic information
Locus name	AT5G50960
Alias	NBP35
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	NUCLEOTIDE BINDING PROTEIN 35 (NBP35); FUNCTIONS IN: iron-sulfur cluster binding, protein homodimerization activity, nucleotide binding; LOCATED IN: cytosol;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function ATP binding
Sequence	AT5G50960.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G50960.1  miRNA: ath-miR838 miRNA: ath-miR838 mfe: -27.7 kcal/mol  p-value: 0.003157  position: 778  target 5' G    U        U      C  3'             GUGC AGGAGUAG AGAGAA                 CACG UCUUCAUC UCUUUU      miRNA  3' A    U        U         5'
Ortholog Group
Ortholog Groups: OG5_126620	Accession Taxon NP_189086 Arabidopsis thaliana NP_193689 Arabidopsis thaliana NP_568748 ( AT5G50960 ) Arabidopsis thaliana CMC136C Cyanidioschyzon merolae strain 10D CML231C Cyanidioschyzon merolae strain 10D CMR311C Cyanidioschyzon merolae strain 10D 107287 Chlamydomonas reinhardtii 133548 Chlamydomonas reinhardtii ACO60908 Micromonas sp. RCC299 ACO63904 Micromonas sp. RCC299 ACO68933 Micromonas sp. RCC299 NP_001044086 Oryza sativa Japonica Group NP_001047347 Oryza sativa Japonica Group NP_001050706 Oryza sativa Japonica Group e_gw1.17.00.44.1 Ostreococcus tauri fgenesh1_pg.C_Chr_01.0001000320 Ostreococcus tauri fgenesh1_pg.C_Chr_07.0001000186 Ostreococcus tauri e_gw1.19.212.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_4140004 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_610102 Physcomitrella patens subsp. patens 29848.m004694 Ricinus communis 29883.m002014 Ricinus communis 30190.m010987 Ricinus communis e_gw1.14.55.1 Thalassiosira pseudonana CCMP1335 estExt_fgenesh1_pg.C_chr_40611 Thalassiosira pseudonana CCMP1335 gw1.5.364.1 Thalassiosira pseudonana CCMP1335 XP_002954172 Volvox carteri f. nagariensis XP_002956879 Volvox carteri f. nagariensis XP_002958167 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23264 1.4E-190 2 342 No hit NA SUPERFAMILY SSF52540 1.7E-53 45 242 IPR027417 P-loop containing nucleoside triphosphate hydrolase Pfam PF13614 4.5E-7 62 112 IPR025669 AAA domain ProSitePatterns PS01215 NA 166 182 IPR000808 Mrp, conserved site Pfam PF10609 3.9E-30 169 240 IPR019591 ATPase-like, ParA/MinD SUPERFAMILY SSF52540 1.7E-53 278 324 IPR027417 P-loop containing nucleoside triphosphate hydrolase
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787