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Locus name | AT5G05100 |
Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Others | Effect for Senescence | unclear | Gene Description | nucleic acid binding; FUNCTIONS IN: nucleic acid binding; | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | Gene Ontology | | Sequence | AT5G05100.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
| Details | | target: AT5G05100.1 miRNA: ath-miR854a miRNA: ath-miR854a mfe: -48.1 kcal/mol p-value: 0.000022
position: 819 target 5' C U 3' CUCCUCCUCCCUAUCCUCGUC GAGGAGGAGGGAUAGGAGUAG miRNA 3' 5'
target: AT5G05100.1 miRNA: ath-miR854b miRNA: ath-miR854b mfe: -48.1 kcal/mol p-value: 0.000006
position: 819 target 5' C U 3' CUCCUCCUCCCUAUCCUCGUC GAGGAGGAGGGAUAGGAGUAG miRNA 3' 5'
target: AT5G05100.1 miRNA: ath-miR854c miRNA: ath-miR854c mfe: -48.1 kcal/mol p-value: 0.000004
position: 819 target 5' C U 3' CUCCUCCUCCCUAUCCUCGUC GAGGAGGAGGGAUAGGAGUAG miRNA 3' 5'
target: AT5G05100.1 miRNA: ath-miR854d miRNA: ath-miR854d mfe: -48.1 kcal/mol p-value: 0.000015
position: 819 target 5' C U 3' CUCCUCCUCCCUAUCCUCGUC GAGGAGGAGGGAUAGGAGUAG miRNA 3' 5'
target: AT5G05100.1 miRNA: ath-miR854e miRNA: ath-miR854e mfe: -48.1 kcal/mol p-value: 0.000002
position: 819 target 5' C U 3' CUCCUCCUCCCUAUCCUCGUC GAGGAGGAGGGAUAGGAGUAG miRNA 3' 5'
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Ortholog Group | |
| Ortholog Groups: OG5_176979 | |
Cross Link | |
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