Basic information
Locus name	AT3G14590
Alias	NTMC2T6.2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	NTMC2T6.2; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008);
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT3G14590.1 | Genomic | mRNA | CDS | Protein AT3G14590.2 | Genomic | mRNA | CDS | Protein AT3G14590.3 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G14590.1  miRNA: ath-miR1886.3 miRNA: ath-miR1886.3 mfe: -22.7 kcal/mol  p-value: 0.011264  position: 1902  target 5' G  C            G      G  3'             AG GAGAUGAAGUCU UUGGUU                 UC UUCUACUUUAGA AAUUAA      miRNA  3'    A                      5'  target: AT3G14590.2  miRNA: ath-miR1886.3 miRNA: ath-miR1886.3 mfe: -22.7 kcal/mol  p-value: 0.011142  position: 1801  target 5' G  C            G      G  3'             AG GAGAUGAAGUCU UUGGUU                 UC UUCUACUUUAGA AAUUAA      miRNA  3'    A                      5'  target: AT3G14590.3  miRNA: ath-miR1886.3 miRNA: ath-miR1886.3 mfe: -22.7 kcal/mol  p-value: 0.010085  position: 1530  target 5' G  C            G      G  3'             AG GAGAUGAAGUCU UUGGUU                 UC UUCUACUUUAGA AAUUAA      miRNA  3'    A                      5'
Ortholog Group
Ortholog Groups: OG5_156369	Accession Taxon NP_001118626 ( AT3G14590 ) Arabidopsis thaliana NP_188077 Arabidopsis thaliana NP_564637 Arabidopsis thaliana NP_001042557 Oryza sativa Japonica Group NP_001046658 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_3280029 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_1090039 Physcomitrella patens subsp. patens 29759.m000282 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR16122 0.0 8 671 No hit NA SMART SM00239 3.5E-12 253 350 IPR000008 C2 calcium-dependent membrane targeting SUPERFAMILY SSF49562 2.2E-26 253 369 IPR008973 C2 calcium/lipid-binding domain, CaLB Pfam PF00168 3.7E-17 256 334 IPR000008 C2 calcium-dependent membrane targeting ProSiteProfiles PS50004 12.9 256 335 IPR018029 C2 membrane targeting protein Coils Coil NA 667 688 No hit NA
Subcellular Localization
Localization 1 Localization cytosol Evidence SUBAcon Pubmed ID 23180787
Localization 2 Localization endoplasmic reticulum Evidence SUBAcon Pubmed ID 23180787