Basic information
Locus name	AT4G28600
Alias	NPGR2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	no pollen germination related 2 (NPGR2); FUNCTIONS IN: calmodulin binding; LOCATED IN: plasma membrane;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT4G28600.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_152255	Accession Taxon NP_194589 ( AT4G28600 ) Arabidopsis thaliana 143707 Chlamydomonas reinhardtii NP_001048906 Oryza sativa Japonica Group NP_001064828 Oryza sativa Japonica Group 29637.m000769 Ricinus communis 29981.m000579 Ricinus communis XP_002948718 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23083 7.7E-169 73 739 No hit NA Pfam PF13181 0.2 92 114 IPR019734 Tetratricopeptide repeat SMART SM00028 26.0 162 195 IPR019734 Tetratricopeptide repeat SUPERFAMILY SSF48452 9.0E-10 163 197 No hit NA ProSiteProfiles PS50005 5.8 465 498 IPR019734 Tetratricopeptide repeat ProSiteProfiles PS50293 9.4 465 569 IPR013026 Tetratricopeptide repeat-containing domain SMART SM00028 31.0 465 498 IPR019734 Tetratricopeptide repeat SUPERFAMILY SSF48452 9.0E-10 467 566 No hit NA SMART SM00028 89.0 500 533 IPR019734 Tetratricopeptide repeat SMART SM00028 66.0 536 569 IPR019734 Tetratricopeptide repeat SUPERFAMILY SSF48452 1.8E-17 538 731 No hit NA ProSiteProfiles PS50005 6.3 592 625 IPR019734 Tetratricopeptide repeat ProSiteProfiles PS50293 19.4 592 733 IPR013026 Tetratricopeptide repeat-containing domain SMART SM00028 34.0 592 625 IPR019734 Tetratricopeptide repeat ProSiteProfiles PS50005 11.3 626 659 IPR019734 Tetratricopeptide repeat SMART SM00028 0.0 626 659 IPR019734 Tetratricopeptide repeat Pfam PF00515 2.9E-4 633 657 IPR001440 Tetratricopeptide TPR-1 SMART SM00028 13.0 697 733 IPR019734 Tetratricopeptide repeat
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787