Leaf Senescence DataBase

Basic information

Locus name

AT4G25910

Alias

NFU3

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Others

Effect for Senescence

unclear

Gene Description

NFU3; FUNCTIONS IN: structural molecule activity; INVOLVED IN: iron-sulfur cluster assembly, chloroplast organization; LOCATED IN: chloroplast;

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

biological process	iron-sulfur cluster assembly
molecular function	iron ion binding iron-sulfur cluster binding

Sequence

AT4G25910.1 | Genomic | mRNA | CDS | Protein

Ortholog Group

Ortholog Groups: OG5_191012

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR11178	1.1E-76	83	236	No hit	NA
SUPERFAMILY	SSF117916	8.1E-24	86	159	No hit	NA
Pfam	PF01106	1.1E-24	89	155	IPR001075	NIF system FeS cluster assembly, NifU, C-terminal
SUPERFAMILY	SSF117916	3.7E-15	165	234	No hit	NA
Pfam	PF01106	8.1E-8	171	229	IPR001075	NIF system FeS cluster assembly, NifU, C-terminal

Subcellular Localization

Localization 1
	Localization	chloroplast
	Evidence	Localization with GFP-fusion protein (GFP:cDNA)
	Pubmed ID	10737809