Basic information
Locus name	AT2G21950
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification:SKP1
Effect for Senescence	Unclear
Gene Description	SKP1 interacting partner 6
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	molecular function protein binding
Sequence	AT2G21950.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G21950.1  miRNA: ath-miR172b miRNA: ath-miR172b mfe: -23.3 kcal/mol  p-value: 0.010934  position:  246  target 5' C            C      G 3'             UGAAUC UGGUG GUGUUG              ACUUAG AUUAC CACGAC   miRNA  3' C      A            G 5'
Ortholog Group
Ortholog Groups: OG5_190889	Accession Taxon NP_565522 ( AT2G21950 ) Arabidopsis thaliana NP_001060610 Oryza sativa Japonica Group 28256.m000140 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32188 1.0E-86 5 372 No hit NA SUPERFAMILY SSF117281 5.8E-53 71 355 No hit NA Pfam PF01344 1.7E-12 118 160 IPR006652 Kelch repeat type 1 SMART SM00612 3.2E-8 127 173 IPR006652 Kelch repeat type 1 Pfam PF01344 1.7E-9 165 209 IPR006652 Kelch repeat type 1 SMART SM00612 0.6 174 225 IPR006652 Kelch repeat type 1