Basic information
Locus name	AT5G52660
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	myb family transcription factor; FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: regulation of transcription;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function DNA binding chromatin binding
Sequence	AT5G52660.1 | Genomic | mRNA | CDS | Protein AT5G52660.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_136211	Accession Taxon NP_001030662 Arabidopsis thaliana NP_001031823 Arabidopsis thaliana NP_187571 Arabidopsis thaliana NP_568108 Arabidopsis thaliana NP_568776 ( AT5G52660 ) Arabidopsis thaliana NP_850756 Arabidopsis thaliana NP_851177 Arabidopsis thaliana ACO66089 Micromonas sp. RCC299 NP_001047742 Oryza sativa Japonica Group NP_001056559 Oryza sativa Japonica Group NP_001058324 Oryza sativa Japonica Group e_gw1.04.00.501.1 Ostreococcus tauri e_gw1.06.00.251.1 Ostreococcus tauri fgenesh1_pg.scaffold_160000002 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_198000070 Physcomitrella patens subsp. patens gw1.46.107.1 Physcomitrella patens subsp. patens 29805.m001497 Ricinus communis 30169.m006616 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12802 8.2E-65 55 145 No hit NA SUPERFAMILY SSF46689 6.0E-16 66 122 IPR009057 Homeodomain-like ProSiteProfiles PS51294 13.8 67 121 IPR017930 Myb domain TIGRFAM TIGR01557 2.2E-18 70 119 IPR006447 Myb domain, plants SMART SM00717 9.6E-10 71 119 IPR001005 SANT/Myb domain Pfam PF00249 9.0E-10 72 116 IPR001005 SANT/Myb domain