Basic information
Locus name	AT5G49620
Alias	AtMYB78
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	myb domain protein 78 (AtMYB78); FUNCTIONS IN: transcription factor activity, DNA binding; INVOLVED IN: response to salt stress, response to abscisic acid stimulus, regulation of transcription, DNA-dependent; EXPRESSED IN: stem;
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function chromatin binding
Sequence	AT5G49620.1 | Genomic | mRNA | CDS | Protein AT5G49620.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_170500	Accession Taxon NP_187301 Arabidopsis thaliana NP_199773 ( AT5G49620 ) Arabidopsis thaliana NP_001042810 Oryza sativa Japonica Group NP_001054560 Oryza sativa Japonica Group 30076.m004607 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10641 7.8E-72 22 321 No hit NA ProSiteProfiles PS51294 22.8 23 79 IPR017930 Myb domain SUPERFAMILY SSF46689 8.8E-26 25 136 IPR009057 Homeodomain-like SMART SM00717 5.0E-15 27 77 IPR001005 SANT/Myb domain Pfam PF00249 3.6E-15 28 75 IPR001005 SANT/Myb domain ProSiteProfiles PS51294 11.3 80 144 IPR017930 Myb domain SMART SM00717 2.9E-10 80 142 IPR001005 SANT/Myb domain Pfam PF00249 3.9E-12 81 138 IPR001005 SANT/Myb domain