Basic information
Locus name	AT1G35160
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nucleic acid degradation:Endonuclease
Effect for Senescence	Unclear
Gene Description	Endonuclease-putative
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	molecular function protein domain specific binding
Sequence	AT1G35160.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G35160.1  miRNA: ath-miR1886 miRNA: ath-miR1886 mfe: -24.1 kcal/mol  p-value: 0.012994  position:  1051  target 5' U                U   U 3'             GUUUUGUUUUACUUCU CUC              UAAAGUAGAGUGAAGA GAG   miRNA  3' C                    U 5'
Ortholog Group
Ortholog Groups: OG5_126706	Accession Taxon NP_001031868 Arabidopsis thaliana NP_001031982 Arabidopsis thaliana NP_001077649 Arabidopsis thaliana NP_001154216 Arabidopsis thaliana NP_564167 Arabidopsis thaliana NP_564249 Arabidopsis thaliana NP_564451 Arabidopsis thaliana NP_564453 ( AT1G35160 ) Arabidopsis thaliana NP_565176 Arabidopsis thaliana NP_566174 Arabidopsis thaliana NP_567344 Arabidopsis thaliana NP_568229 Arabidopsis thaliana NP_568325 Arabidopsis thaliana NP_568557 Arabidopsis thaliana NP_569012 Arabidopsis thaliana NP_849698 Arabidopsis thaliana NP_851274 Arabidopsis thaliana NP_973884 Arabidopsis thaliana CMP239C Cyanidioschyzon merolae strain 10D 185967 Chlamydomonas reinhardtii 187228 Chlamydomonas reinhardtii ACO61927 Micromonas sp. RCC299 ACO63066 Micromonas sp. RCC299 NP_001047234 Oryza sativa Japonica Group NP_001051051 Oryza sativa Japonica Group NP_001053003 Oryza sativa Japonica Group NP_001061856 Oryza sativa Japonica Group NP_001068067 Oryza sativa Japonica Group gw1.18.00.170.1 Ostreococcus tauri estExt_Genewise1.C_1400036 Physcomitrella patens subsp. patens estExt_Genewise1.C_2010026 Physcomitrella patens subsp. patens estExt_Genewise1.C_670097 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_3480002 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_1370075 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_730052 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1370068 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_73000051 Physcomitrella patens subsp. patens gw1.46.9.1 Physcomitrella patens subsp. patens 28842.m000907 Ricinus communis 29908.m006038 Ricinus communis 29908.m006068 Ricinus communis 29908.m006234 Ricinus communis 30174.m009120 Ricinus communis estExt_fgenesh1_pm.C_chr_30002 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR18860 9.4E-187 9 259 IPR000308 14-3-3 protein PIRSF PIRSF000868 1.5E-177 9 253 IPR000308 14-3-3 protein SUPERFAMILY SSF48445 7.9E-106 10 243 IPR023410 14-3-3 domain Pfam PF00244 1.4E-115 11 247 IPR023410 14-3-3 domain SMART SM00101 3.7E-203 11 254 IPR023410 14-3-3 domain Coils Coil NA 17 45 No hit NA PRINTS PR00305 2.8E-88 45 74 IPR000308 14-3-3 protein ProSitePatterns PS00796 NA 51 61 IPR023409 14-3-3 protein, conserved site PRINTS PR00305 2.8E-88 94 118 IPR000308 14-3-3 protein PRINTS PR00305 2.8E-88 125 147 IPR000308 14-3-3 protein PRINTS PR00305 2.8E-88 160 186 IPR000308 14-3-3 protein PRINTS PR00305 2.8E-88 187 213 IPR000308 14-3-3 protein PRINTS PR00305 2.8E-88 214 243 IPR000308 14-3-3 protein ProSitePatterns PS00797 NA 223 242 IPR023409 14-3-3 protein, conserved site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787