Basic information
Locus name	AT5G04200
Alias	AtMC9
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	metacaspase 9 (AtMC9); FUNCTIONS IN: cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: apoplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase C14, caspase catalytic (InterPro:IPR011600); BEST Arabidopsis thaliana protein match is: AtMC6 (metacaspase 6); cysteine-type endopeptidase (TAIR:AT1G79320.1); Has 738 Blast hits to 725 proteins in 191 species: Archae - 4; Bacteria - 185; Metazoa - 0; Fungi - 198; Plants - 188; Viruses - 0; Other Eukaryotes - 163 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process proteolysis molecular function cysteine-type endopeptidase activity
Sequence	AT5G04200.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_178018	Accession Taxon NP_196040 ( AT5G04200 ) Arabidopsis thaliana NP_001065680 Oryza sativa Japonica Group 29822.m003455 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31810 7.6E-192 7 324 No hit NA SUPERFAMILY SSF52129 8.7E-7 9 134 No hit NA Pfam PF00656 2.7E-77 10 321 IPR011600 Peptidase C14, caspase catalytic
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787