Basic information
Locus name	AT5G52050
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	MATE efflux protein-related; FUNCTIONS IN: drug transporter activity, antiporter activity; INVOLVED IN: multidrug transport; LOCATED IN: membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Multi antimicrobial extrusion protein MatE (InterPro:IPR002528); BEST Arabidopsis thaliana protein match is: MATE efflux protein-related (TAIR:AT4G23030.1); Has 6036 Blast hits to 5974 proteins in 1099 species: Archae - 127; Bacteria - 3788; Metazoa - 122; Fungi - 208; Plants - 687; Viruses - 0; Other Eukaryotes - 1104 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process drug transmembrane transport transmembrane transport cellular component membrane molecular function antiporter activity drug transmembrane transporter activity
Pathway	Reactome REACT_15518 REACT_20633
Sequence	AT5G52050.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11206 1.4E-213 2 492 No hit NA Pfam PF01554 3.2E-27 45 204 IPR002528 Multi antimicrobial extrusion protein TIGRFAM TIGR00797 8.3E-70 45 448 IPR002528 Multi antimicrobial extrusion protein Pfam PF01554 7.3E-38 272 434 IPR002528 Multi antimicrobial extrusion protein