Basic information
Locus name	AT3G48390
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	MA3 domain-containing protein; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MA3 domain-containing protein (TAIR:AT5G63190.2); Has 1440 Blast hits to 588 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 993; Fungi - 6; Plants - 337; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function binding
Sequence	AT3G48390.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129731	Accession Taxon NP_001031708 Arabidopsis thaliana NP_173687 Arabidopsis thaliana NP_190411 ( AT3G48390 ) Arabidopsis thaliana NP_567708 Arabidopsis thaliana NP_568968 Arabidopsis thaliana NP_851255 Arabidopsis thaliana 192147 Chlamydomonas reinhardtii ACO63800 Micromonas sp. RCC299 NP_001049417 Oryza sativa Japonica Group NP_001053119 Oryza sativa Japonica Group NP_001060879 Oryza sativa Japonica Group 0500010244 Ostreococcus tauri e_gw1.214.71.1 Physcomitrella patens subsp. patens e_gw1.72.35.1 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_15000024 Physcomitrella patens subsp. patens 28644.m000917 Ricinus communis 30147.m013821 Ricinus communis thaps1_ua_kg.chr_24000018 Thalassiosira pseudonana CCMP1335 XP_002956063 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12626 8.7E-241 30 633 No hit NA SUPERFAMILY SSF48371 5.2E-42 54 214 IPR016024 Armadillo-type fold ProSiteProfiles PS51366 25.7 56 177 IPR003891 Initiation factor eIF-4 gamma, MA3 Pfam PF02847 3.0E-32 57 168 IPR003891 Initiation factor eIF-4 gamma, MA3 SMART SM00544 4.1E-40 57 168 IPR003891 Initiation factor eIF-4 gamma, MA3 SUPERFAMILY SSF48371 6.3E-34 217 336 IPR016024 Armadillo-type fold ProSiteProfiles PS51366 23.1 220 341 IPR003891 Initiation factor eIF-4 gamma, MA3 SMART SM00544 8.4E-34 221 332 IPR003891 Initiation factor eIF-4 gamma, MA3 Pfam PF02847 3.6E-33 222 332 IPR003891 Initiation factor eIF-4 gamma, MA3 SUPERFAMILY SSF48371 6.8E-37 349 507 IPR016024 Armadillo-type fold ProSiteProfiles PS51366 21.1 351 472 IPR003891 Initiation factor eIF-4 gamma, MA3 Pfam PF02847 1.8E-29 352 462 IPR003891 Initiation factor eIF-4 gamma, MA3 SMART SM00544 3.0E-35 352 463 IPR003891 Initiation factor eIF-4 gamma, MA3 SUPERFAMILY SSF48371 3.1E-34 511 627 IPR016024 Armadillo-type fold ProSiteProfiles PS51366 22.2 514 633 IPR003891 Initiation factor eIF-4 gamma, MA3 SMART SM00544 6.1E-31 515 624 IPR003891 Initiation factor eIF-4 gamma, MA3 Pfam PF02847 2.1E-33 516 623 IPR003891 Initiation factor eIF-4 gamma, MA3