Basic information
Locus name	AT3G03720
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling:Amino acid transport
Effect for Senescence	Unclear
Gene Description	Cationic amino acid transporter putative.Upregulated in senescent leaves.
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	biological process amino acid transmembrane transport cellular component membrane molecular function amino acid transmembrane transporter activity
Sequence	AT3G03720.1 | Genomic | mRNA | CDS | Protein AT3G03720.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G03720.1  miRNA: ath-miR401 miRNA: ath-miR401 mfe: -27.7 kcal/mol  p-value: 0.019368  position:  927  target 5' G        G        G   G 3'             GUUGGUUG GCACUGGU UUG              CAGCCAGC UGUGGUCA AGC   miRNA  3' A                 A     5'  target: AT3G03720.2  miRNA: ath-miR401 miRNA: ath-miR401 mfe: -27.7 kcal/mol  p-value: 0.016501  position:  564  target 5' G        G        G   G 3'             GUUGGUUG GCACUGGU UUG              CAGCCAGC UGUGGUCA AGC   miRNA  3' A                 A     5'
Ortholog Group
Ortholog Groups: OG5_126699	Accession Taxon NP_001154586 Arabidopsis thaliana NP_187022 ( AT3G03720 ) Arabidopsis thaliana NP_198510 Arabidopsis thaliana NP_563754 Arabidopsis thaliana NP_849822 Arabidopsis thaliana CME062C Cyanidioschyzon merolae strain 10D 205765 Chlamydomonas reinhardtii 206100 Chlamydomonas reinhardtii ACO67941 Micromonas sp. RCC299 NP_001047620 Oryza sativa Japonica Group NP_001050796 Oryza sativa Japonica Group NP_001064675 Oryza sativa Japonica Group NP_001067309 Oryza sativa Japonica Group e_gw1.15.00.109.1 Ostreococcus tauri e_gw1.360.2.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_2300007 Physcomitrella patens subsp. patens 30072.m000947 Ricinus communis 30072.m000948 Ricinus communis 30174.m008769 Ricinus communis gw1.1.181.1 Thalassiosira pseudonana CCMP1335 gw1.10.71.1 Thalassiosira pseudonana CCMP1335 thaps1_ua_kg.chr_23000036 Thalassiosira pseudonana CCMP1335 thaps1_ua_kg.chr_4000246 Thalassiosira pseudonana CCMP1335 XP_002949048 Volvox carteri f. nagariensis XP_002953996 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11785 8.0E-210 1 582 IPR002293 Amino acid/polyamine transporter I PIRSF PIRSF006060 9.4E-81 21 534 IPR002293 Amino acid/polyamine transporter I Pfam PF13520 3.2E-56 28 409 No hit NA Pfam PF13906 2.8E-20 528 578 No hit NA
Subcellular Localization
Localization 1 Localization plasma membrane Evidence SUBAcon Pubmed ID 23180787
Localization 2 Localization vacuole Evidence SUBAcon Pubmed ID 23180787