Basic information
Locus name	AT4G34120
Alias	LEJ1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1 (LEJ1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2) (TAIR:AT4G36910.1); Has 4785 Blast hits to 4390 proteins in 996 species: Archae - 682; Bacteria - 3142; Metazoa - 98; Fungi - 77; Plants - 110; Viruses - 0; Other Eukaryotes - 676 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT4G34120.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_135655	Accession Taxon NP_195409 Arabidopsis thaliana NP_567952 ( AT4G34120 ) Arabidopsis thaliana 185012 Chlamydomonas reinhardtii NP_001061514 Oryza sativa Japonica Group NP_001062584 Oryza sativa Japonica Group e_gw1.11.00.310.1 Ostreococcus tauri e_gw1.147.37.1 Physcomitrella patens subsp. patens e_gw1.69.72.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_840006 Physcomitrella patens subsp. patens 28718.m000037 Ricinus communis 29801.m003153 Ricinus communis thaps1_ua_kg.chr_14000064 Thalassiosira pseudonana CCMP1335 XP_002958659 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF54631 9.9E-37 74 226 No hit NA PANTHER PTHR11911 2.4E-43 77 233 No hit NA Pfam PF00571 1.3E-14 79 133 IPR000644 Cystathionine beta-synthase, core ProSiteProfiles PS51371 13.5 83 145 IPR000644 Cystathionine beta-synthase, core SMART SM00116 1.8E-4 88 136 IPR000644 Cystathionine beta-synthase, core Pfam PF00571 1.2E-15 173 226 IPR000644 Cystathionine beta-synthase, core ProSiteProfiles PS51371 14.9 177 234 IPR000644 Cystathionine beta-synthase, core SMART SM00116 6.1E-13 180 228 IPR000644 Cystathionine beta-synthase, core
Subcellular Localization
Localization	plastid
Evidence	SUBAcon
Pubmed ID	23180787