Basic information   
Locus name AT3G62590
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene Descriptionlipase class 3 family protein; FUNCTIONS IN: triacylglycerol lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: lipase class 3 family protein (TAIR:AT1G02660.1); Has 135 Blast hits to 132 proteins in 41 species: Archae - 0; Bacteria - 5; Metazoa - 17; Fungi - 25; Plants - 53; Viruses - 0; Other Eukaryotes - 35 (source: NCBI BLink).
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
biological process
molecular function
Pathway
Reactome
SequenceAT3G62590.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction      
Details
target: AT3G62590.1 
miRNA: ath-miR414
miRNA: ath-miR414
mfe: -33.9 kcal/mol 
p-value: 0.000363 

position: 606 
target 5' C                 C  A  3' 
           GAUGAUGAUGAUGAAGA GA     
           CUGCUACUACUACUUCU CU     
miRNA  3' A                 A     5' 
Ortholog Group      
Ortholog Groups: OG5_140482
AccessionTaxon
NP_191727Arabidopsis thaliana
NP_563660Arabidopsis thaliana
NP_567131 ( AT3G62590 ) Arabidopsis thaliana
205924Chlamydomonas reinhardtii
ACO70423Micromonas sp. RCC299
NP_001042614Oryza sativa Japonica Group
NP_001043592Oryza sativa Japonica Group
1400010005Ostreococcus tauri
e_gw1.23.147.1Physcomitrella patens subsp. patens
estExt_gwp_gw1.C_2180053Physcomitrella patens subsp. patens
gw1.88.184.1Physcomitrella patens subsp. patens
29742.m001439Ricinus communis
30076.m004679Ricinus communis
XP_002947175Volvox carteri f. nagariensis
XP_002957248Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR310734.8E-3041649No hitNA
SUPERFAMILYSSF534741.4E-24298491No hitNA
PfamPF017642.0E-24317455IPR002921Lipase, class 3
CoilsCoilNA566591No hitNA