Basic information
Locus name	AT5G43460
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	lesion inducing protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: lesion inducing protein-related (TAIR:AT1G04340.1); Has 89 Blast hits to 89 proteins in 18 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 79; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT5G43460.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_141639	Accession Taxon NP_171929 Arabidopsis thaliana NP_193178 Arabidopsis thaliana NP_199159 ( AT5G43460 ) Arabidopsis thaliana 189204 Chlamydomonas reinhardtii ACO61152 Micromonas sp. RCC299 NP_001048971 Oryza sativa Japonica Group NP_001052179 Oryza sativa Japonica Group NP_001064710 Oryza sativa Japonica Group fgenesh1_pg.C_Chr_03.0001000257 Ostreococcus tauri estExt_Genewise1.C_1960046 Physcomitrella patens subsp. patens estExt_Genewise1.C_690109 Physcomitrella patens subsp. patens 29603.m000525 Ricinus communis 29603.m000526 Ricinus communis XP_002950314 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF05514 1.4E-51 1 134 IPR008637 HR-like lesion-inducer PANTHER PTHR31474 4.2E-95 2 154 No hit NA
Subcellular Localization
Localization	extracellular,plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787