Basic information
Locus name	AT4G32040
Alias	KNAT5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	KNOTTED1-LIKE HOMEOBOX GENE 5 (KNAT5); FUNCTIONS IN: transcription factor activity, transcription activator activity; INVOLVED IN: detection of ethylene stimulus; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: KNOX2 (InterPro:IPR005541), ELK (InterPro:IPR005539), Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), KNOX1 (InterPro:IPR005540), Homeodomain-like (InterPro:IPR009057), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription activator/ transcription factor (TAIR:AT5G25220.2); Has 5273 Blast hits to 5272 proteins in 259 species: Archae - 0; Bacteria - 0; Metazoa - 1780; Fungi - 177; Plants - 3217; Viruses - 0; Other Eukaryotes - 99 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component nucleus molecular function DNA binding
Sequence	AT4G32040.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF03790 1.4E-17 117 159 IPR005540 KNOX1 PANTHER PTHR11850 1.0E-71 119 362 No hit NA Pfam PF03791 1.9E-21 169 222 IPR005541 KNOX2 Pfam PF03789 2.7E-6 281 302 IPR005539 ELK ProSiteProfiles PS51213 9.4 281 301 IPR005539 ELK ProSiteProfiles PS50071 12.0 301 364 IPR001356 Homeodomain SMART SM00389 4.0E-10 303 368 IPR001356 Homeodomain SUPERFAMILY SSF46689 1.9E-15 303 367 IPR009057 Homeodomain-like Pfam PF05920 3.9E-16 321 360 IPR008422 Homeobox KN domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787