Basic information
Locus name	AT4G05530
Alias	IBR1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	INDOLE-3-BUTYRIC ACID RESPONSE 1 (IBR1); FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: tropinone reductase, putative / tropine dehydrogenase, putative (TAIR:AT2G29150.1); Has 76520 Blast hits to 76377 proteins in 2166 species: Archae - 459; Bacteria - 42330; Metazoa - 3676; Fungi - 3727; Plants - 1467; Viruses - 5; Other Eukaryotes - 24856 (source: NCBI BLink).
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process metabolic process molecular function oxidoreductase activity
Sequence	AT4G05530.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129079	Accession Taxon NP_180489 Arabidopsis thaliana NP_567300 ( AT4G05530 ) Arabidopsis thaliana 137062 Chlamydomonas reinhardtii ACO61162 Micromonas sp. RCC299 NP_001062630 Oryza sativa Japonica Group estExt_Genewise1.C_330145 Physcomitrella patens subsp. patens 29842.m003518 Ricinus communis 46478.m000014 Ricinus communis XP_002957258 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24322 1.5E-128 1 254 No hit NA SUPERFAMILY SSF51735 1.2E-72 10 250 No hit NA PRINTS PR00081 2.8E-31 13 30 IPR002347 Glucose/ribitol dehydrogenase Pfam PF13561 1.7E-39 19 250 No hit NA PRINTS PR00080 8.2E-5 87 98 IPR002198 Short-chain dehydrogenase/reductase SDR PRINTS PR00081 2.8E-31 87 98 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00081 2.8E-31 133 149 IPR002347 Glucose/ribitol dehydrogenase ProSitePatterns PS00061 NA 146 174 IPR020904 Short-chain dehydrogenase/reductase, conserved site PRINTS PR00080 8.2E-5 159 178 IPR002198 Short-chain dehydrogenase/reductase SDR PRINTS PR00081 2.8E-31 159 178 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00081 2.8E-31 179 196 IPR002347 Glucose/ribitol dehydrogenase PRINTS PR00081 2.8E-31 214 234 IPR002347 Glucose/ribitol dehydrogenase
Subcellular Localization
Localization	peroxisome
Evidence	SUBAcon
Pubmed ID	23180787