Basic information   
Locus name AT5G63760
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene DescriptionIBR domain-containing protein; FUNCTIONS IN: protein binding, zinc ion binding; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, RanBP2-type (InterPro:IPR001876); BEST Arabidopsis thaliana protein match is: IBR domain-containing protein (TAIR:AT5G63750.1); Has 1361 Blast hits to 1359 proteins in 147 species: Archae - 0; Bacteria - 0; Metazoa - 751; Fungi - 99; Plants - 254; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
cellular component
molecular function
SequenceAT5G63760.1 | Genomic | mRNA | CDS | Protein
AT5G63760.2 | Genomic | mRNA | CDS | Protein
Ortholog Group      
Ortholog Groups: OG5_170763
AccessionTaxon
NP_201178Arabidopsis thaliana
NP_201180Arabidopsis thaliana
NP_201181Arabidopsis thaliana
NP_680158Arabidopsis thaliana
NP_974987 ( AT5G63760 ) Arabidopsis thaliana
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR116850.01452No hitNA
SUPERFAMILYSSF578507.4E-1123113No hitNA
ProSiteProfilesPS500898.72684IPR001841Zinc finger, RING-type
SMARTSM006472.4E-21106174IPR002867Zinc finger, C6HC-type
SUPERFAMILYSSF578501.5E-8114181No hitNA
PfamPF014851.6E-9121174IPR002867Zinc finger, C6HC-type
SMARTSM006470.1190252IPR002867Zinc finger, C6HC-type
SUPERFAMILYSSF578504.9E-9198253No hitNA
ProSitePatternsPS01358NA420439IPR001876Zinc finger, RanBP2-type
Subcellular Localization   
Localizationnucleus
EvidenceSUBAcon
Pubmed ID23180787