Basic information
Locus name	AT3G55430
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:Cell wall
Effect for Senescence	Unclear
Gene Description	Beta-1,3 glucanase like protein. Upregulated in senescent leaves.
Evidence	Molecular evidence: SSH and Northern [Ref 1]
References	1: Gepstein S, Sabehi G, Carp MJ, Hajouj T, Nesher MF, Yariv I, Dor C, Bassani M Large-scale identification of leaf senescence-associated genes. Plant J. 2003 Dec;36(5):629-42
Gene Ontology	biological process carbohydrate metabolic process molecular function hydrolase activity, hydrolyzing O-glycosyl compounds
Pathway	KEGG map00500 (EC 3.2.1.39)
Sequence	AT3G55430.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G55430.1  miRNA: ath-miR833-5p miRNA: ath-miR833-5p mfe: -26.8 kcal/mol  p-value: 0.011315  position:  712  target 5' C              C      G 3'             CU GACCG GUGCA CAAGCA              GA CUGGC CAUGU GUUUGU   miRNA  3' U  U     U     U        5'  target: AT3G55430.1  miRNA: ath-miR837-5p miRNA: ath-miR837-5p mfe: -25.8 kcal/mol  p-value: 0.016603  position:  1244  target 5' C             C G   A 3'             GAAACGGACAAGG G UGG              CUUUGCUUGUUCU U ACU   miRNA  3' A             U G   A 5'
Ortholog Group
Ortholog Groups: OG5_164272	Accession Taxon NP_191103 ( AT3G55430 ) Arabidopsis thaliana NP_001059262 Oryza sativa Japonica Group NP_001068545 Oryza sativa Japonica Group 29977.m000251 Ricinus communis 30003.m000339 Ricinus communis 30003.m000340 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR32227 0.0 5 449 No hit NA Pfam PF00332 4.3E-80 29 341 IPR000490 Glycoside hydrolase, family 17 SUPERFAMILY SSF51445 2.0E-76 29 341 IPR017853 Glycoside hydrolase, superfamily Pfam PF07983 1.1E-19 365 436 IPR012946 X8 SMART SM00768 8.0E-49 365 449 IPR012946 X8
Subcellular Localization
Localization	extracellular
Evidence	SUBAcon
Pubmed ID	23180787